TEMPLATE Laboratory test screening - JM (Laboratory test screening - JM)

TEMPLATE IDLaboratory test screening - JM
ConceptLaboratory test screening - JM
DescriptionNot Specified
PurposeNot Specified
References
Authorsname: Heather Leslie; organisation: Atomica Informatics; email: heather.leslie@atomicainformatics.com; date: 2024-12-29
Other Details Languagename: Heather Leslie; organisation: Atomica Informatics; email: heather.leslie@atomicainformatics.com; date: 2024-12-29
OtherDetails Language Independent{PARENT:MD5-CAM-1.0.1=B8C2E96DB0A27622D7007F276769C10E, original_language=ISO_639-1::en, MD5-CAM-1.0.1=1fbfeaf78fbd5896bf5d460da8f26fce, sem_ver=10.0.0}
Language useden
Citeable Identifier1013.26.1114
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  • Yes 
  • No 
  • Unknown 
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  • Yes 
  • No 
  • Unknown 
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[at0003 and name/value='Date/time sent to laboratory'], code=at0003, itemType=ELEMENT, level=5, text=Date/time sent to laboratory, description=Indication of timing related to the investigation., comment=The 'Timing' data element has deliberately been loosely modelled to support the myriad of ways that it can be used in questionnaires to capture when an investigation was carried out. The specific and intended semantics can be further clarified in a template. For example: the actual date and/or time; the start and stop time for the investigation; the interval of time during which the investigation was carried out; the duration of the investigation; the age of the individual at the time of the investigation; or the duration of time since it occurred. A partial date is valid, using the DV_DATE_TIME data type, to record only a year., uncommonOntologyItems=null, occurencesFormal=0..*, occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_DATE_TIME, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[at0003 and name/value='Date/time result reported'], code=at0003, itemType=ELEMENT, level=5, text=Date/time result reported, description=Indication of timing related to the investigation., comment=The 'Timing' data element has deliberately been loosely modelled to support the myriad of ways that it can be used in questionnaires to capture when an investigation was carried out. The specific and intended semantics can be further clarified in a template. For example: the actual date and/or time; the start and stop time for the investigation; the interval of time during which the investigation was carried out; the duration of the investigation; the age of the individual at the time of the investigation; or the duration of time since it occurred. A partial date is valid, using the DV_DATE_TIME data type, to record only a year., uncommonOntologyItems=null, occurencesFormal=0..*, occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_DATE_TIME, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[at0002], code=at0002, itemType=ELEMENT, level=5, text=Conclusion, description=Brief description, summary or interpretation of the investigation outcome., comment=For example: 'All results within normal range', 'Normal', 'Further investigations needed'. This data element is not to contain a representation of the actual results or findings. In that situation, nest an appropriate CLUSTER archetype within the following 'Additional details' SLOT., uncommonOntologyItems=null, occurencesFormal=0..*, occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.specimen.v1], code=at0000, itemType=CLUSTER, level=5, text=Specimen collection details, description=A physical sample collected from, or related to, an individual for the purpose of investigation, examination or analysis., comment=For example: Tissue or body fluid., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.specimen.v1]/items[at0029], code=at0029, itemType=ELEMENT, level=6, text=Specimen type, description=The type of specimen., comment=For example: Venous blood, bacterial culture, cytology, or tissue sample. Coding of the specimen type with a terminology is preferred, where possible., uncommonOntologyItems={fhir_mapping=Specimen.type}, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.specimen.v1]/items[at0034], code=at0034, itemType=ELEMENT, level=6, text=Date/time received by laboratory, description=The date and time that the sample was received at the laboratory., comment=null, uncommonOntologyItems={fhir_mapping=Specimen.receivedTime}, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_DATE_TIME, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.specimen.v1]/items[at0015], code=at0015, itemType=ELEMENT, level=6, text=Date/time collected, description=The date and time that collection has been ordered to take place or has taken place., comment=This datetime will be captured primarily in the INSTRUCTION timing, ACTION time or OBSERVATION times. However, as this is a critical piece of information, it can be useful to also associate it directly with the specimen itself., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_DATE_TIME, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.specimen.v1]/items[at0041], code=at0041, itemType=ELEMENT, level=6, text=Adequacy for testing, description=Information about whether the specimen was adequate for testing., comment=This element is intended to be used to record a judgement about whether or not the specimen quality was good enough for testing, and whether or not testing has been carried out. Coding of the specimen quality issues with a terminology is preferred, where possible., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_CODED_TEXT, bindings=null, values=
  • Satisfactory 
  • Unsatisfactory - analysed 
  • Unsatisfactory - not analysed 
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  • Positive
  • Indeterminate
  • Negative
  • Unknown
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  •  Quantity
  •  Count
  •  Duration
  •  Proportion
  •  Text
  •  Coded Text Value set: external
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  •  Coded Text
    • Detected 
    • Not detected 
    • Indeterminate 
  •  Text
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antibody.v0]/items[at0054], code=at0054, itemType=ELEMENT, level=6, text=Quantitative result, description=Quantitative assessment of the amount of the identified antibody in the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=
  •  QuantityUnits:
    • k[iU]/L
    • [iU]/mL
  •  Proportion
    • Ratio
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antibody.v0]/items[at0022], code=at0022, itemType=ELEMENT, level=6, text=Comment, description=Additional narrative about the test finding not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0], code=at0000, itemType=CLUSTER, level=5, text=Antigen test finding, description=The result of a laboratory test designed to directly identify and measure the presence of a specific antigen, typically associated with a microorganism, tissue, or physiological process, within a clinical specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0049], code=at0049, itemType=ELEMENT, level=6, text=Test name, description=Name of the antigen test., comment=Coding with an external terminology is recommended, if available. For example: SARS-CoV-2 rapid antigen test, HIV p24 Antigen ELISA, PSA chemiluminescent immunoassay, AFP ELISA, HER2/neu immunohistochemistry (IHC) test., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0057], code=at0057, itemType=ELEMENT, level=6, text=Antigen target, description=The specific antigenic or protein structure or component that the test is designed to detect., comment=Coding with an external terminology is recommended, if available. For example: spike protein (SARS-CoV-2), nucleocapsid protein (SARS-CoV-2), capsid protein (HIV), lipopolysaccharides (LPS) in gram-negative bacteria, prostate-specific antigen (PSA), alpha-fetoprotein (AFP), carcinoembryonic antigen (CEA), HER2/neu, CA-125., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0059], code=at0059, itemType=ELEMENT, level=6, text=Microbial target, description=The name of the microorganism associated with the antigen, if relevant., comment=Coding with an external terminology is recommended, if available. For example: SARS-CoV-2, HIV., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0055], code=at0055, itemType=ELEMENT, level=6, text=Test method, description=Method used for the antigen test., comment=Coding with an external terminology is recommended, if available. For example: lateral flow immunoassay, ELISA, immunohistochemistry (IHC)., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0050], code=at0050, itemType=ELEMENT, level=6, text=Presence, description=Statement about detection of the identified antigen in the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_CODED_TEXT, bindings=null, values=
  • Detected 
  • Not detected 
  • Indeterminate 
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0054], code=at0054, itemType=ELEMENT, level=6, text=Quantitative result, description=Quantitative assessment of the amount of the identified antigen in the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • ng/mL
  • k[iU]/L
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_antigen.v0]/items[at0022], code=at0022, itemType=ELEMENT, level=6, text=Comment, description=Additional narrative about the test finding not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0], code=at0000, itemType=CLUSTER, level=5, text=Blood cell count and differential finding, description=Relative and absolute amounts of blood cells identified within an identified specimen., comment=For example: whole blood; urine; or CSF., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0001], code=at0001, itemType=ELEMENT, level=6, text=Red cell count (RCC), description=Total number of erythrocytes per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10*6/uL
  • 10*12/L
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0002], code=at0002, itemType=ELEMENT, level=6, text=White cell count (WCC), description=Total number of leucocytes per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0006], code=at0006, itemType=ELEMENT, level=6, text=Neutrophil count, description=Number of neutrophils per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0004], code=at0004, itemType=ELEMENT, level=6, text=Lymphocyte count, description=Number of lymphocytes per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0009], code=at0009, itemType=ELEMENT, level=6, text=Monocyte count, description=Number of monocytes per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0007], code=at0007, itemType=ELEMENT, level=6, text=Eosinophil count, description=Number of eosinophils per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0008], code=at0008, itemType=ELEMENT, level=6, text=Basophil count, description=Number of basophils per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0011], code=at0011, itemType=ELEMENT, level=6, text=Blast count, description=Number of blast cells per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0010], code=at0010, itemType=ELEMENT, level=6, text=Platelet count, description=Number of platelets per volume unit of the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_QUANTITY, bindings=null, values=Units:
  • 10⁹/L
  • 10*3/uL
  • 1/[HPF]
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0016], code=at0016, itemType=ELEMENT, level=6, text=Neutrophil %, description=The proportion of neutrophils compared to the total white blood cell count., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_PROPORTION, bindings=null, values=
  • Percent
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0017], code=at0017, itemType=ELEMENT, level=6, text=Lymphocyte %, description=The proportion of lymphocytes compared to the total white blood cell count., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_PROPORTION, bindings=null, values=
  • Percent
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0018], code=at0018, itemType=ELEMENT, level=6, text=Monocyte %, description=The proportion of monocytes compared to the total white blood cell count., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_PROPORTION, bindings=null, values=
  • Percent
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0019], code=at0019, itemType=ELEMENT, level=6, text=Eosinophil %, description=The proportion of eosinophils compared to the white blood cell count., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_PROPORTION, bindings=null, values=
  • Percent
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0020], code=at0020, itemType=ELEMENT, level=6, text=Basophil %, description=The proportion of basophils observed compared to the total white blood cell count., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_PROPORTION, bindings=null, values=
  • Percent
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0021], code=at0021, itemType=ELEMENT, level=6, text=Blast %, description=The proportion of blast cells compared to the total white blood cell count., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_PROPORTION, bindings=null, values=
  • Percent
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_blood_cell_count.v0]/items[at0014], code=at0014, itemType=ELEMENT, level=6, text=Comment, description=Additional narrative about the blood cell count, not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0], code=at0000, itemType=CLUSTER, level=5, text=Microbiology culture findings, description=Findings observed from culturing a specimen to detect and identify the growth of microorganisms., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0]/items[at0018], code=at0018, itemType=ELEMENT, level=6, text=Overall growth, description=Statement about the presence or absence of any microbial growth on culture., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_CODED_TEXT, bindings=null, values=
  • Growth 
  • No growth 
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0]/items[at0002], code=at0002, itemType=CLUSTER, level=6, text=Per microorganism, description=Details about specific culture findings for each identified organism., comment=null, uncommonOntologyItems=null, occurencesFormal=0..*, occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0]/items[at0002]/items[at0003], code=at0003, itemType=ELEMENT, level=7, text=Microorganism name, description=Name of the microorganism cultured., comment=For example: name of a bacteria, virus or fungus., uncommonOntologyItems=null, occurencesFormal=1..1, occurencesText=Mandatory, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0]/items[at0002]/items[at0021], code=at0021, itemType=ELEMENT, level=7, text=Growth, description=Observation about the presence or absence of growth of the identified organism on culture., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_CODED_TEXT, bindings=null, values=
  • Detected 
  • Not detected 
  • Indeterminate 
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0]/items[at0002]/items[at0004], code=at0004, itemType=ELEMENT, level=7, text=Qualitative result, description=Qualitative assessment of the amount of the identified microorganism grown on culture., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_CODED_TEXT, bindings=null, values=
  • No growth 
  • Light growth 
  • Moderate growth 
  • Heavy growth 
, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_culture.v0]/items[at0002]/items[at0016], code=at0016, itemType=ELEMENT, level=7, text=Comment, description=Additional narrative about the culture findings for the identified microorganism, not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_parasitology.v0], code=at0000, itemType=CLUSTER, level=5, text=Microbiology parasitology findings, description=A laboratory test to directly detect, identify and quantify parasites or their developmental forms in a specimen, using microscopy., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_parasitology.v0]/items[at0003], code=at0003, itemType=CLUSTER, level=6, text=Per parasite, description=Per targeted parasite and developmental form., comment=null, uncommonOntologyItems=null, occurencesFormal=0..*, occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_parasitology.v0]/items[at0003]/items[at0004], code=at0004, itemType=ELEMENT, level=7, text=Parasite name, description=Name of the parasite., comment=Coding with an external terminology is recommended, if available. For example: Giardia, Entamoeba, Hookworm, Toxoplasma, Plasmodium or Trypanosoma, uncommonOntologyItems=null, occurencesFormal=1..1, occurencesText=Mandatory, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_parasitology.v0]/items[at0003]/items[at0010], code=at0010, itemType=ELEMENT, level=7, text=Developmental form, description=Name of the developmental stage or lifecycle of the parasite., comment=Coding with an external terminology is recommended, if available. For example: egg, cyst, larva, trophozoite., uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=[openEHR-EHR-OBSERVATION.investigation_screening-JM.v0]/data[at0022]/events[at0023]/data[at0001]/items[at0026]/items[openEHR-EHR-CLUSTER.lab_microscopy_parasitology.v0]/items[at0003]/items[at0005], code=at0005, itemType=ELEMENT, level=7, text=Presence, description=Statement about detection of the identified parasite in the specimen., comment=null, uncommonOntologyItems=null, occurencesFormal=null, occurencesText=null, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_CODED_TEXT, bindings=null, values=
  • Detected 
  • Not detected 
  • Indeteminate 
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  •  Coded Text
    • Absent 
    • Scant 
    • Low 
    • Moderate 
    • High 
  •  Text
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  • Gram stain 
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  • Gram-positive cocci
  • Gram-negative cocci
  • Gram-positive rods
  • Gram-negative rods
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  • Detected 
  • Not detected 
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  • Scant 
  • Low 
  • Moderate 
  • High 
  • Absent 
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  • Encapsulated microorganism
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  • Detected 
  • Not detected 
  • Indeterminate 
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  • Scant 
  • Low 
  • Moderate 
  • High 
  • Absent 
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  • Ziehl-Neelsen stain 
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  • Acid-fast bacilli
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  • Detected 
  • Not detected 
  • Indeterminate 
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  • Scant 
  • Low 
  • Moderate 
  • High 
  • Absent 
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  • Detected 
  • Not detected 
  • Indeterminate 
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