ARCHETYPE Biospecimen summary - semen (openEHR-EHR-EVALUATION.biospecimen_summary-semen.v0)

ARCHETYPE IDopenEHR-EHR-EVALUATION.biospecimen_summary-semen.v0
ConceptBiospecimen summary - semen
DescriptionSummary or persistent information about a sperm specimen.
UseUse to record summary or persistent record about about a sperm specimen. This archetype has been designed to track the collection, storage, management, use or disposition of a sperm specimen, especially in assisted reproduction treatment. Details about the biospecimen, including collection information, can be recorded using the CLUSTER.specimen in the 'Specimen details' SLOT. Details about the location of the biospecimen can be recorded using the CLUSTER.specimen_container and CLUSTER.biobank in the 'Storage details' SLOT.
PurposeTo record a summary or persistent record about a sperm specimen.
ReferencesAshford, P., et al., Standard terminology for reproductive tissue and cell products for use in ART. Human Reproduction Open, 2019. 2019(2): p. hoz005.
Copyright© openEHR Foundation
AuthorsAuthor name: Heather Leslie
Organisation: Atomica Informatics
Email: heather.leslie@atomicainformatics.com
Date originally authored: 2022-02-09
Other Details LanguageAuthor name: Heather Leslie
Organisation: Atomica Informatics
Email: heather.leslie@atomicainformatics.com
Date originally authored: 2022-02-09
OtherDetails Language Independent{licence=This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/., custodian_organisation=openEHR Foundation, references=Ashford, P., et al., Standard terminology for reproductive tissue and cell products for use in ART. Human Reproduction Open, 2019. 2019(2): p. hoz005., original_namespace=org.openehr, original_publisher=openEHR Foundation, custodian_namespace=org.openehr, MD5-CAM-1.0.1=513E2912D5286B7AA3D7C29B205DE49D, build_uid=d7786f5f-6509-46bd-b643-78155a2ce5a9, ip_acknowledgements=This artefact includes content from SNOMED Clinical Terms® (SNOMED CT®) which is copyrighted material of the International Health Terminology Standards Development Organisation (IHTSDO). Where an implementation of this artefact makes use of SNOMED CT content, the implementer must have the appropriate SNOMED CT Affiliate license - for more information contact https://www.snomed.org/snomed-ct/get-snomed or info@snomed.org., revision=0.0.1-alpha}
Keywordsassisted reproduction, testicular, testicle, tissue, semen, sperm
Lifecyclein_development
UID035d8e23-ab6f-40d7-9a46-3c9def35de43
Language useden
Citeable Identifier1013.1.6043
Revision Number0.0.1-alpha
AllArchetype [runtimeNameConstraintForConceptName=null, archetypeConceptBinding=null, archetypeConceptDescription=Summary or persistent information about a sperm specimen., archetypeConceptComment=null, otherContributors=Vebjørn Arntzen, Oslo University Hospital, Norway (openEHR Editor)
Peter Fedorcsak, University of Oslo, Norway (openEHR Editor)
Liv Laugen, ​Oslo University Hospital, Norway, Norway (openEHR Editor)
Heather Leslie, Atomica Informatics, Australia (openEHR Editor), originalLanguage=en, translators=Norwegian Bokmål: Liv Laugen, ​Oslo University Hospital, Norway, liv.laugen@ous-hf.no
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openEHR-EHR-CLUSTER.biobank_storage.v0 and specialisations or
openEHR-EHR-CLUSTER.biobank_storage.v1 and specialisations or
openEHR-EHR-CLUSTER.specimen_container.v0 and specialisations or
openEHR-EHR-CLUSTER.specimen_container.v1 and specialisations, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/data[at0001]/items[at0010], code=at0010, itemType=ELEMENT, level=2, text=Disposition, description=The final disposition of the biospecimen., comment=Usually this involves use, donation or disposal., uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/data[at0001]/items[at0011], code=at0011, itemType=ELEMENT, level=2, text=Date of disposition, description=The date/time when the biospecimen was preserved., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_DATE_TIME, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/data[at0001]/items[at0012], code=at0012, itemType=ELEMENT, level=2, text=Expiry date, description=The date beyond the biospecimen is not to be used., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_DATE_TIME, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/data[at0001]/items[at0016], code=at0016, itemType=ELEMENT, level=2, text=Comment, description=Additional narrative about the biospecimen, not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/data[at0001]/items[at0.3], code=at0.3, itemType=ELEMENT, level=2, text=Sperm procurement, description=The method used to collect or recover the sperm., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of:
  •  Coded Text
    • Ejaculation [Sperm procured from ejaculate.]
    • Epididymal aspirate [Sperm procured by aspiration from epididymis.]
    • Testicular aspirate [Sperm procured by percutaneous aspiration from testis.]
    • Testicular biopsy [Sperm procured by biopsy of testis.]
    • Unknown [Procurement method is not specified, or not applicable.]
  •  Text
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  •  Coded Text
    • Unwashed [Raw ejaculate.]
    • Washed [The ejaculate has been washed by centrifugation in a buffer solution.]
    • Prepared [Viable sperm cells have been isolated from other contents of the seminal fluid.]
    • Unknown [No information about the preparation of sperm is provided, or not applicable.]
  •  Text
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