ARCHETYPE Conversion variant (openEHR-EHR-CLUSTER.conversion_variant.v0)

ARCHETYPE IDopenEHR-EHR-CLUSTER.conversion_variant.v0
ConceptConversion variant
DescriptionA sequence change where, compared to a reference sequence, a range of nucleotides are replaced by a sequence from elsewhere in the genome.
UseThis archetype should be used inside the "Variant" SLOT of the "Genetic variant" archetype.
PurposeTo describe a conversion variant observed in a sequence according to the HGVS nomenclature.
References"Den Dunnen et al. (2016) HGVS recommendations for the description of sequence variants: 2016 update. Hum.Mutat. 25: 37: 564-569"
Copyright© openEHR Foundation
AuthorsAuthor name: Cecilia Mascia
Organisation: CRS4, Italy
Email: cecilia.mascia@crs4.it
Date originally authored: 2017-02-24
Other Details LanguageAuthor name: Cecilia Mascia
Organisation: CRS4, Italy
Email: cecilia.mascia@crs4.it
Date originally authored: 2017-02-24
OtherDetails Language Independent{licence=This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/., custodian_organisation=openEHR Foundation, references="Den Dunnen et al. (2016) HGVS recommendations for the description of sequence variants: 2016 update. Hum.Mutat. 25: 37: 564-569", original_namespace=org.openehr, original_publisher=openEHR Foundation, custodian_namespace=org.openehr, MD5-CAM-1.0.1=75648202E0E1DEC7E4FD8FA01C6A670E, build_uid=7030256c-da14-43dd-b45d-6e7029de28ff, revision=0.0.1-alpha}
Keywordsconversion, variation, genetic, genomic, variant
Lifecyclein_development
UID214bb6a6-0c9b-40e8-8afb-7bf47e5a2fa0
Language useden
Citeable Identifier1013.1.3749
Revision Number0.0.1-alpha
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Florian Kaercher, Charité Berlin, Germany
Francesca Frexia, CRS4, Italy
Gianluigi Zanetti, CRS4, Italy
Heather Leslie, Atomica Informatics, Australia (openEHR Editor)
Gideon Giacomelli, Charité Berlin, Germany
Paolo Uva, CRS4, Italy
Silje Ljosland Bakke, Nasjonal IKT HF, Norway (openEHR Editor)
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