ARCHETYPE Specimen container (openEHR-EHR-CLUSTER.specimen_container.v1)

Name: Specimen container
License: http://creativecommons.org/licenses/by-sa/4.0/

ARCHETYPE ID	openEHR-EHR-CLUSTER.specimen_container.v1
Concept	Specimen container
Description	Details of a container used to hold, transport and/or archive a specimen for laboratory examination.
Use	Use to record details of a container used to hold transport and/or archive a specimen for laboratory examination. This archetype has been designed to be used within OBSERVATION.laboratory test_result, CLUSTER.specimen, CLUSTER.biobank_storage, CLUSTER.biospecimen_summary and other clinically appropriate archetypes. Commonly the CLUSTER.specimen and the CLUSTER.specimen_container will be used as a pair, with order of nesting varying as appropriate for the use case. For example: - The ‘Specimen container’ can be nested within 'Specimen'; for example, when a venous blood specimen is divided between two vials, or a whole large intestine is divided into three buckets. - The 'Specimen' can be nested within 'Specimen container'; for example, when a bucket of formalin contains a section of large intestine and a rectum, or a jar contains five individually marked moles.
Purpose	To record details of a container used to hold, transport and/or archive a specimen for laboratory examination.
References	DICOM Standards Committee, Working Groups 26, Pathology: DICOM Supplement 122—Specimen Module and Revised Pathology SOP Classes [Internet]. Published June 27, 2008. [Accessed date 2022-04-25]. Available from: https://www.dicomstandard.org/News-dir/ftsup/docs/sups/sup122.pdf. HL7 FHIR Resource - Specimen R4.0.1 [Internet]. Health Level Seven; [accessed 2022-04-25]. Available from: http://www.hl7.org/implement/standards/fhir/specimen.html. ISO 6710:2017 Single-use containers for human venous blood specimen collection [Internet]; [accessed 2022-04-25]. Available from: https://www.iso.org/standard/69659.html. EUDAMED - European Database on Medical Devices - [Internet]; [accessed 2022-04-25]. Available from: https://ec.europa.eu/tools/eudamed/#/screen/home.
Copyright	© openEHR Foundation
Authors	Author name: Dr Ian McNicoll Organisation: Ocean Informatics Email: ian.mcnicoll@oceaninformatics.com Date originally authored: 2009-06-21
Other Details Language	Author name: Dr Ian McNicoll Organisation: Ocean Informatics Email: ian.mcnicoll@oceaninformatics.com Date originally authored: 2009-06-21
OtherDetails Language Independent	{licence=This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/., custodian_organisation=openEHR Foundation, references=DICOM Standards Committee, Working Groups 26, Pathology: DICOM Supplement 122—Specimen Module and Revised Pathology SOP Classes [Internet]. Published June 27, 2008. [Accessed date 2022-04-25]. Available from: https://www.dicomstandard.org/News-dir/ftsup/docs/sups/sup122.pdf. HL7 FHIR Resource - Specimen R4.0.1 [Internet]. Health Level Seven; [accessed 2022-04-25]. Available from: http://www.hl7.org/implement/standards/fhir/specimen.html. ISO 6710:2017 Single-use containers for human venous blood specimen collection [Internet]; [accessed 2022-04-25]. Available from: https://www.iso.org/standard/69659.html. EUDAMED - European Database on Medical Devices - [Internet]; [accessed 2022-04-25]. Available from: https://ec.europa.eu/tools/eudamed/#/screen/home., original_namespace=org.openehr, original_publisher=openEHR Foundation, custodian_namespace=org.openehr, MD5-CAM-1.0.1=86469A298616E7CE233B12A8019966B0, build_uid=699acb36-5140-43d7-96b1-7cd2b2a6b7d0, revision=1.0.0}
Keywords	specimen, lab, laboratory, pathology, transport medium, swab, vial, vacuum tube, slide, additive, sample
Lifecycle	published
UID	dec1165f-c612-4ca9-85ea-e8323f9b356d
Language used	en
Citeable Identifier	1013.1.2193
Revision Number	1.0.0
All	Archetype [runtimeNameConstraintForConceptName=null, archetypeConceptBinding=null, archetypeConceptDescription=Details of a container used to hold, transport and/or archive a specimen for laboratory examination., archetypeConceptComment=null, otherContributors=Michael Anywar, Universitätsklinikum SH, Germany Vebjørn Arntzen, Oslo University Hospital, Norway (openEHR Editor) Koray Atalag University of Auckland, New Zealand Silje Ljosland Bakke, Helse Vest IKT AS, Norway (openEHR Editor) Paulo Bandiera-Paiva, Federal University of Sao Paulo, Brazil Keisha Barwise, MOHW/IDB HSSP Project, Jamaica SB Bhattacharyya, Bhattacharyyas Clinical Records Research & Informatics LLP, India Peter Fedorcsak, Oslo University Hospital Heather Grain, Llewelyn Grain Informatics, Australia Martin Grundberg, Cambio Healthcare Systems, Sweden Evelyn Hovenga, EJSH Consulting, Australia Liv Laugen, Oslo University Hospital, Norway, Norway (openEHR Editor) Heather Leslie, Atomica Informatics, Australia (openEHR Editor) Pramil Liyanage, Ministry of Health, Sri Lanka Manisha Mantri, C-DAC, India Cecilia Mascia, CRS4, Italy Ian McNicoll, freshEHR Clinical Informatics, United Kingdom (openEHR Editor) Mikael Nyström, Cambio Healthcare Systems AB, Sweden Masafumi Okada, University of Tokyo, Japan Vanessa Pereira, Luxembourg Institute of Health & Better, Portugal Jussara Rotzsch, Hospital Alemão Oswaldo Cruz, Brazil Natalia Strauch, Medizinische Hochschule Hannover, Germany Norwegian Review Summary, Norwegian Public Hospitals, Norway Anders Thurin, VGR, Sweden Pencho Tonchev, Medical University- Pleven, Bulgaria John Tore Valand, Helse Bergen, Norway (openEHR Editor) Wouter Zanen, Eurotranplant, Netherlands Lin Zhang, Taikang Insurance Group, ChinaMichael Anywar, Universitätsklinikum SH, Germany Vebjørn Arntzen, Oslo universitetssykehus HF, Norway (openEHR Editor) Koray Atalag University of Auckland, New Zealand Silje Ljosland Bakke, Helse Vest IKT AS, Norway (Nasjonal IKT redaktør) Paulo Bandiera-Paiva, Federal University of Sao Paulo, Brazil Keisha Barwise, MOHW/IDB HSSP Project, Jamaica SB Bhattacharyya, Bhattacharyyas Clinical Records Research & Informatics LLP, India Johan Bjerner, Fürst, Norway Peter Fedorcsak, Oslo University Hospital Heather Grain, Llewelyn Grain Informatics, Australia Martin Grundberg, Cambio Healthcare Systems, Sweden Anca Heyd, DIPS ASA, Norway Evelyn Hovenga, EJSH Consulting, Australia Gunnar Jårvik, Helse Vest IKT AS, Norway Nils Kolstrup, Skansen Legekontor og Nasjonalt Senter for samhandling og telemedisin, Norway Liv Laugen, Oslo universitetssykehus, Norway (openEHR Editor) Heather Leslie, Atomica Informatics, Australia (openEHR Editor) Pramil Liyanage, Ministry of Health, Sri Lanka Manisha Mantri, C-DAC, India Cecilia Mascia, CRS4, Italy Ian McNicoll, freshEHR Clinical Informatics, United Kingdom (openEHR Editor) Mikael Nyström, Cambio Healthcare Systems AB, Sweden Bjørn Næss, DIPS ASA, Norway Masafumi Okada, University of Tokyo, Japan Vanessa Pereira, Luxembourg Institute of Health & Better, Portugal Norwegian Review Summary, Norwegian Public Hospitals, Norway Jussara Rotzsch, Hospital Alemão Oswaldo Cruz, Brazil Ole Martin Sand, DIPS ASA, Norway Frode Stenvik, Helse Sør-Øst, Norway Natalia Strauch, Medizinische Hochschule Hannover, Germany Anders Thurin, VGR, Sweden Pencho Tonchev, Medical University- Pleven, Bulgaria John Tore Valand, Haukeland Universitetssjukehus, Norway (openEHR Editor) Wouter Zanen, Eurotranplant, Netherlands Lin Zhang, Taikang Insurance Group, China, originalLanguage=en, translators= German: Sarah Ballout, Natalia Strauch, MHH-Hanover, Medizinische Hochschule Hannover, ballout.sarah@mh-hannover.de, Strauch.Natalia@mh-hannover.de Swedish: Linda Aulin, Region Stockholm, Karolinska University Hospital, linda.aulin@sll.se Norwegian Bokmål: Kristian Berg; Line Silsand, Liv Laugen, Vebjørn Arntzen, Universitetssykehuset Nord-Norge, Oslo University Hospital, Norway, kristian.berg@unn.no; line.silsand@unn.no, liv.laugen@ous-hf.no, varntzen@ous-hf.no Slovenian: Application: Adl Designer Notes: Generated automatically by Adl Designer , subjectOfData=unconstrained, archetypeTranslationTree=null, topLevelToAshis={source=[], identities=[], contacts=[], ism_transition=[], provider=[], protocol=[], description=[], events=[], details=[], context=[], target=[], capabilities=[], items=[ResourceSimplifiedHierarchyItem [path=/items[at0005], code=at0005, itemType=ELEMENT, level=1, text=Container type, description=The type of container associated with the specimen., comment=Coding with an external terminology is strongly recommended, such as SNOMED CT, LOINC, or local lab terminologies. For example: Loinc code 'LA20376-2' for Vial. SNOMED code '702283008' for Non-evacuated blood collection tube, gel separator, '22566001' for Cytology brush, device or '701394007' for General specimen receptacle transport container., uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0003], code=at0003, itemType=ELEMENT, level=1, text=Container ID, description=The unique identifier given to the container., comment=This has multiple occurrence to make it possible to register several IDs, for example EUDAMED number, batch number, tracing number, suffix number for type of container or manufacturer's barcode., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of:* Identifier Text , extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0013], code=at0013, itemType=ELEMENT, level=1, text=Description, description=Narrative description about the container., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0037], code=at0037, itemType=ELEMENT, level=1, text=Components, description=Description about the physical components of the container., comment=For example: lid color., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0026], code=at0026, itemType=ELEMENT, level=1, text=Additive/s, description=Introduced substance to preserve, maintain or enhance the specimen., comment=This element has multiple occurrence to make it possible to register more than one container additives. Coding with an external terminology is strongly recommended, such as SNOMED CT, preferred IUPAC name (PIN), CAS Registry Number. Examples: Formalin, Citrate, EDTA., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0035], code=at0035, itemType=ELEMENT, level=1, text=Capacity, description=The capacity of the container., comment=A narrativ description or the specific capacity, e.g. volume. For example: "125" (125 mL), or the text "Draw volume of 2 mL - 5 ml", "Internal dimensions are 12 cm diameter by 9 cm high"., uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of: Text Quantity , extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0038], code=at0038, itemType=ELEMENT, level=1, text=Minimum volum, description=The minimum volume to be conditioned in the container., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of: Text Quantity , extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0028], code=at0028, itemType=SLOT, level=1, text=Additional details, description=Additional structured details related to the specimen container., comment=For example: the location of storage in a biobank, transportation details., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=Include:* openEHR-EHR-CLUSTER.biobank_storage.v1 and specialisations or openEHR-EHR-CLUSTER.specimen_transport.v0 or openEHR-EHR-CLUSTER.specimen_transport.v1 or openEHR-EHR-CLUSTER.biobank_storage.v0, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0029], code=at0029, itemType=SLOT, level=1, text=Contents, description=The contents of this container., comment=For example: subcontainers; or a specimen., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=Include:* openEHR-EHR-CLUSTER.specimen.v1 and specialisations or openEHR-EHR-CLUSTER.specimen_container.v0 and specialisations or openEHR-EHR-CLUSTER.specimen_container.v1, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0036], code=at0036, itemType=ELEMENT, level=1, text=Comment, description=Additional narrative about the transportation process not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null]], other_participations=[], content=[], state=[], activities=[], data=[], relationships=[], credentials=[]}, topLevelItems={items=ResourceSimplifiedHierarchyItem [path=ROOT_/, code=at0000, itemType=CLUSTER, level=0, text=null, description=null, comment=null, uncommonOntologyItems=null, occurencesFormal=1..1, occurencesText=Mandatory, cardinalityFormal=1.., cardinalityText= (Cardinality: 1.., unordered), subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=null, extendedValues=null]}, addHierarchyItemsTo=items, currentHierarchyItemsForAdding=[ResourceSimplifiedHierarchyItem [path=/items[at0005], code=at0005, itemType=ELEMENT, level=1, text=Container type, description=The type of container associated with the specimen., comment=Coding with an external terminology is strongly recommended, such as SNOMED CT, LOINC, or local lab terminologies. For example: Loinc code 'LA20376-2' for Vial. SNOMED code '702283008' for Non-evacuated blood collection tube, gel separator, '22566001' for Cytology brush, device or '701394007' for General specimen receptacle transport container., uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0003], code=at0003, itemType=ELEMENT, level=1, text=Container ID, description=The unique identifier given to the container., comment=This has multiple occurrence to make it possible to register several IDs, for example EUDAMED number, batch number, tracing number, suffix number for type of container or manufacturer's barcode., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of:* Identifier Text , extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0013], code=at0013, itemType=ELEMENT, level=1, text=Description, description=Narrative description about the container., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0037], code=at0037, itemType=ELEMENT, level=1, text=Components, description=Description about the physical components of the container., comment=For example: lid color., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0026], code=at0026, itemType=ELEMENT, level=1, text=Additive/s, description=Introduced substance to preserve, maintain or enhance the specimen., comment=This element has multiple occurrence to make it possible to register more than one container additives. Coding with an external terminology is strongly recommended, such as SNOMED CT, preferred IUPAC name (PIN), CAS Registry Number. Examples: Formalin, Citrate, EDTA., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0035], code=at0035, itemType=ELEMENT, level=1, text=Capacity, description=The capacity of the container., comment=A narrativ description or the specific capacity, e.g. volume. For example: "125" (125 mL), or the text "Draw volume of 2 mL - 5 ml", "Internal dimensions are 12 cm diameter by 9 cm high"., uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of: Text Quantity , extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0038], code=at0038, itemType=ELEMENT, level=1, text=Minimum volum, description=The minimum volume to be conditioned in the container., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CHOICE, bindings=null, values=Choice of: Text Quantity , extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0028], code=at0028, itemType=SLOT, level=1, text=Additional details, description=Additional structured details related to the specimen container., comment=For example: the location of storage in a biobank, transportation details., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=Include:* openEHR-EHR-CLUSTER.biobank_storage.v1 and specialisations or openEHR-EHR-CLUSTER.specimen_transport.v0 or openEHR-EHR-CLUSTER.specimen_transport.v1 or openEHR-EHR-CLUSTER.biobank_storage.v0, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0029], code=at0029, itemType=SLOT, level=1, text=Contents, description=The contents of this container., comment=For example: subcontainers; or a specimen., uncommonOntologyItems=null, occurencesFormal=0.., occurencesText=Optional, repeating, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=CLUSTER, bindings=null, values=Include:* openEHR-EHR-CLUSTER.specimen.v1 and specialisations or openEHR-EHR-CLUSTER.specimen_container.v0 and specialisations or openEHR-EHR-CLUSTER.specimen_container.v1, extendedValues=null], ResourceSimplifiedHierarchyItem [path=/items[at0036], code=at0036, itemType=ELEMENT, level=1, text=Comment, description=Additional narrative about the transportation process not captured in other fields., comment=null, uncommonOntologyItems=null, occurencesFormal=0..1, occurencesText=Optional, cardinalityFormal=null, cardinalityText=null, subCardinalityFormal=null, subCardinalityText=null, dataType=DV_TEXT, bindings=null, values=, extendedValues=null]], minIndents={}, termBindingRetrievalErrorMessage=null]